I'd still call it less than a bullet. You can also potentially use a wrench to blow up a reactor, but ultimately I wouldn't call a wrench a powerful weapon. (That distinction goes to the reactor.)
I would say the "blame" is transferable indefinitely. The reactor is not responsible either, the enriched uranium is responsible instead, for the damage. But then uranium is not responsible either, the atoms are, that fuse (or fission), or the momentum (of atoms) can also be at blame. There has to be a line that needs to be drawn here.
Wrench can explode a reactor, but it is not made specifically to blow up a reactor. Stuxnet, on the other hand was specifically made to do the damage to fuel cells. Hence it's a weapon and wrench is not.
A wrench is a weapon in the war against loose bolts. However, most people would probably call it a weapon only when wielded with the intention of hitting another person.
I don't think it's fair to characterize the intention of stuxnet as blowing up reactors. From what I've read, the purposeful damage it was designed to inflict was to disable uranium-enriching equipment. I don't recall reading anything about purposeful attempts to use the software to kill or wound.
That's where I'd draw the line: purposeful killing. So I'd describe this as a case of cyber-sabatoge -- not a case of cyber-war.